PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000204959
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family C2H2
Protein Properties Length: 186aa    MW: 20968.2 Da    PI: 7.0981
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000204959genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.30.00024101121121
                    EEETTTTEEESSHHHHHHHHH CS
        zf-C2H2   1 ykCpdCgksFsrksnLkrHir 21 
                    y+Cp+C   F  ++nL  H++
  MDP0000204959 101 YTCPKCXCEFVFSENLDAHMS 121
                    9*******************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    Send to blast
MRIVLVDSSN ASEVSQFCSY NTSSHNQLRD LINLNAIELR GNKEFARTPR SNLSELRSHK  60
VSHPMVNLXX AQQEKNVGSD LSLXARIRTR RXLNKSKYAL YTCPKCXCEF VFSENLDAHM  120
SMNSDCPMDH SQFTWYLEHL AGLKLEATSP NSNATASNED GEKEDMARKQ ATLLTSSAEN  180
QGQPFN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3813922